Rohan Dandage
Systems biologist
Research🔬
Coding 💻
Writing 📝
Research🔬
Cancer systems biology
Systems biology
Biophysics
Need for multi-level integration
Cell Systems↗
2016
Recursive mutational robustness in cancer through intra- and inter-genic compensation
bioRxiv↗
DOI↗
2026
Chromosome arm aneuploidies as genetic vulnerabilities of triple-negative breast cancer
Cancer Research↗
2023
Single-cell imaging of protein dynamics of paralogs reveals mechanisms of gene retention
bioRχiv↗
2023
Identifying features of genome evolution to exploit cancer vulnerabilities
Cell Systems↗
2021
Frequent assembly of chimeric complexes in the protein interaction network of an interspecies yeast hybrid
Molecular Biology and Evolution↗
2020
Paralog dependency indirectly affects the robustness of human cells
Molecular Systems Biology↗
2019
beditor: A computational workflow for designing libraries of guide RNAs for CRISPR base editing
Genetics↗
2019
Differential strengths of molecular determinants guide environment specific mutational fates
PLoS Genetics↗
2018
dms2dfe : Comprehensive workflow for the analysis of deep mutational scanning data
Journal of Open Source Software↗
2017
Classification of chemical chaperones based on their effect on protein folding landscapes
ACS chemical biology↗
2015
Coding💻
Methods
Visualizations
Collaborations
intom⿻
Perturbational robustness estimation using integrative omics data
Source↗
interpretable🧰
toolkit for interpretable learning on graphs
Source↗
beditor🔂
A computational workflow for designing libraries of sgRNAs for CRISPR-mediated base editing (and much more)
Package↗
Source↗
htsimaging🔬
Python package for high-throughput single-cell imaging analysis
Package↗
Source↗
chrov🧬
Chromosome Visualizations
Package↗
Source↗
parag🎆
Interactive visualization of higher-order graphs
Source↗
dseq🧱
Deep sequencing analysis in dataframes
Package↗
Source↗
roux🧰
Convenience functions in Python
Package↗
Source↗
safepy🕸️
Python implementation of Spatial Analysis of Functional Enrichment (SAFE)
Source↗
removestar*️⃣
Tool to automatically replace 'import *' in Python files with explicit imports
Package↗
Source↗
yeast_segmentation🔬
User friendly mask-rcnn segmentation for images of yeast cells
Source↗
Coresia.org website
Website↗
Vite-Node build, Tailwind front, JS-TS middle, Firebase back
This website
Source↗
Forked from↗
JavaScript, CSS
Writing📝
Short-form
Long-form
Fostering AI talent through a community-grounded approach
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2023
Dismantling systemic ableism in health research
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2023
Promoting public participation in research
TBA
On the parallels between levels of biological organizations
TBA
On ableism survivorship
TBA
The Algorithms of Ableism
TBA
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